Low Coverage Genome Sequencing - SRA

SRX199849: Low Coverage Genome Sequencing
8 ILLUMINA (Illumina HiSeq 2000) runs: 19.7M spots, 4G bases, 1.8Gb downloads

UUID: 7e7df727-2c7e-4ae1-9f9f-39d5d5759b70

Design: Low Coverage Genome Sequencing

Submitted by: Broad Institute (BI)

Study: Whole genome sequencing of (LWK) Luhya in Webuye, Kenya HapMap population

Sample: Coriell GM19023

Library:

Name: Sage-109731

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

lsid: broadinstitute.org:bsp.prod.sample:3DAZD

project: G22839

sample_barcode: 219783.0

work_request: 31670

Name	Step	Program	Version	Notes
base caller	2012-08-27 21:46:41.0	GAPipeline	RTA1.13.48	Sequencer Application 1.5.15.1

Runs: 8 runs, 19.7M spots, 4G bases, 1.8Gb

Run	# of Spots	# of Bases	Size	Published
SRR604613	2,467,694	498.5M	231.3Mb	2012-10-22
SRR604619	2,500,573	505.1M	237.5Mb	2012-10-22
SRR604836	2,456,744	496.3M	229.4Mb	2012-10-22
SRR604899	2,469,819	498.9M	229.9Mb	2012-10-22
SRR604924	2,481,782	501.3M	230.4Mb	2012-10-22
SRR604937	2,457,076	496.3M	230.6Mb	2012-10-22
SRR605018	2,460,604	497M	231.9Mb	2012-10-22
SRR605086	2,436,633	492.2M	227.9Mb	2012-10-22

Supplemental Content

Rhodococcus erythropolis DSM 311 16S ribosomal RNA gene, partial sequence
Rhodococcus erythropolis DSM 311 16S ribosomal RNA gene, partial sequence
gi|21552543|gb|AY017137.1|

Nucleotide
Lateolabrax japonicus creatine kinase mRNA, complete cds
Lateolabrax japonicus creatine kinase mRNA, complete cds
gi|2732229868|gb|PP776612.1|

Nucleotide
Homo sapiens solute carrier family 12 (potassium/chloride transporters), member ...
Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 4, mRNA (cDNA clone IMAGE:4943447)
gi|22028104|gb|BC035480.1|

Nucleotide
Aegilops tauschii subsp. strangulata isolate t-6s-43 DG glutamic oxaloacetic tra...
Aegilops tauschii subsp. strangulata isolate t-6s-43 DG glutamic oxaloacetic transaminase 2 (Got2) gene, partial cds
gi|2727447108|gb|OQ076796.1|

Nucleotide
olfactory receptor family 5, partial [Vampyrum spectrum]
olfactory receptor family 5, partial [Vampyrum spectrum]
gi|608620208|gb|AHW55200.1|

Protein

Your browsing activity is empty.

Activity recording is turned off.

SRA